Below is a list of publications by members of MathBio@UM, automatically compiled and updated daily via Google Scholar and Semantic Scholar. Please note that as usual with this type of system, some spurious data may enter the list.

2026

Dose-limited interventions in an epidemiological model

Annour Saad Abdramane , H. Djimramadji , M. Haggar , P. M. T. Djomegni , Julien Arino
2026-05-17
1 citations

Within-host immunology to age-of-infection epidemiology via a virtual cohort

Julien Arino , Morgan Craig , Clotilde Djuikem , Kang-Ling Liao , Stéphanie Portet
2026-05-16
0 citations

Using Floquet theory to unravel far-from equilibrium dynamics in reaction–diffusion systems

V. O. Juma , K. Z. Mapfumo , Stéphanie Portet , A. Madzvamuse
PNAS Nexus 2026-03-01

Mathematical Modelling Techniques

Harald Krogstad , Mohammed Yiha Dawed , P. T. Tchepmo Djomegni , J. Arino
2026-01-30

Deciphering culprits for cyanobacterial blooms and lake vulnerability in north-temperate lakes

Jacob Serpico , B. A. Zambrano-Luna , Christopher M. Heggerud , A. Hastings , R. Milne , Hao Wang
Ecological Modelling 2026

2025

8 quick tips for data-model integration in ecology

Laurinne J. Balstad , Joe Brennan , Marissa L. Baskett , Mattea Berglund , Mei Z Blundell , Jessica A. Bolin , A. A. Briggs , M. C. Fisher , Christopher M. Heggerud , Madeline Jarvis-Cross , L. Mossman , Andrea N. Odell , Jennifer N. Paige , Sophia Pelletier , M. Provost
2025-11-13
0 citations

A multipartite approach for the self-assembly of DNA graph structures

Simona Bonvicini , M. Ferrari
Natural Computing 2025-10-04
0 citations

The R-loop grammar predicts R-loop formation under different topological constraints

M. Ferrari , Svetlana Poznanovic , Manda Riehl , Jacob Lusk , Stella R. Hartono , Georgina Gonzalez-Isunza , F. Chédin , Mariel Vázquez , Nataša Jonoska
PLoS Comput. Biol. 2025-08-01
1 citations

Dynamics of bovine tuberculosis transmission in mixed herds in Chad.

H. Djimramadji , J. Arino , P. M. T. Djomegni , M. Haggar
Mathematical Biosciences 2025-07-07

Criticality governs response dynamics and entrainment of periodically forced ghost cycles.

D. Koch , Ulrike Feudel , A. Koseska
Physical Review E 2025-06-10

A metapopulation model for the spread of cholera

Abdramane Saad , J. Arino , P. M. T. Djomegni , M. Haggar
2025-05-22
1 citations

A model for cholera with infectiousness of deceased individuals and vaccination

Annour Saad Abdramane , J. Arino , P. M. T. Djomegni , M. Haggar
2025-04-10
1 citations

Threshold-based impulsive biocontrol for coffee leaf rust

Clotilde Djuikem , Julien Arino
2025-04-01
1 citations
3 citations

2024

Exploring Zika's dynamics: A scoping review journey from epidemic to equations through mathematical modelling

Jhoana P. Romero–Leiton , E. K. Laison , Rowin Alfaro , E. J. Parmley , Julien Arino , Kamal R. Acharya , Bouchra R. Nasri
Infectious Disease Modelling 2024-12-01

Basic Science and Pathogenesis.

M. E. Keleshteri , Chris Cadonic , T. Ghafourian , Ella Thomson , W. Snow , D. McAllister , J. Djordjevic , S. R. Chowdhury , Paul Fernyhough , J. Fiege , Stéphanie Portet , B. Albensi
Alzheimer's & Dementia 2024-12-01
0 citations

Long-living transients in ecological models: Recent progress, new challenges, and open questions.

A. Morozov , Ulrike Feudel , A. Hastings , K. C. Abbott , K. Cuddington , Christopher M. Heggerud , Sergei V. Petrovskii
Physics of Life Reviews 2024-11-01

Steady state distributions of moving particles in one dimension: with an eye towards axonal transport

J. Dallon , E. Evans , Christopher P. Grant , Stéphanie Portet
Journal of Mathematical Biology 2024-10-30

RNA-mediated double-strand break repair by end-joining mechanisms

Youngkyu Jeon , Yilin Lu , M. Ferrari , Tejasvi Channagiri , Penghao Xu , Chance Meers , Yiqi Zhang , S. Balachander , Vivian S. Park , Stefania Marsili , Z. Pursell , Nataša Jonoska , F. Storici
Nature Communications 2024-09-11
13 citations

MetaCast: A package for broadCASTing epidemiological and ecological models over META-populations

Martin Grunnill , Julien Arino , Abbas Ghasemi , Edward W. Thommes , Jianhong Wu
Journal of Open Source Software 2024-07-17

Evaluating infectious disease outbreak potential and mitigation effectiveness on cruise ships.

R. Mosleh , Mortaza Baky-Haskuee , Abbas Ghasemi , Martin Grunnill , Julien Arino , M. Tofighi , Edward W. Thommes , Jianhong Wu
Journal of Theoretical Biology 2024-06-01

Transmission of Multiple Pathogens Across Species.

Clotilde Djuikem , Julien Arino
Bulletin of Mathematical Biology 2024-05-30

Biological computations: Limitations of attractor-based formalisms and the need for transients.

D. Koch , Akhilesh P. Nandan , G. Ramesan , A. Koseska
Biochemical and Biophysical Research Communications - BBRC 2024-04-16

When and why ecological systems respond to the rate rather than the magnitude of environmental changes

K. C. Abbott , Christopher M. Heggerud , Ying-Cheng Lai , A. Morozov , Sergei V. Petrovskii , K. Cuddington , A. Hastings
Biological Conservation 2024-04-01

Abstract 7381: Mathematical modeling and validation of mechanistic target of rapamycin and N-myristoyltransferase signaling pathways in breast cancer

Abinash Meher , Shailly Varma Shrivastav , Anouska Agarwal , Sheen Dube , Stéphanie Portet , Anuraag Shrivastav
Cancer Research 2024-03-22

A model free method of predicting transient dynamics in anaerobic digestion

Christopher M. Heggerud , Alan Hastings
Journal of the Royal Society Interface 2024-03-01

Is SARS-CoV-2 elimination or mitigation best? Regional and disease characteristics determine the recommended strategy

M. Martignoni , Julien Arino , A. Hurford
Royal Society Open Science 2024-02-07

Redefining pandemic preparedness: Multidisciplinary insights from the CERP modelling workshop in infectious diseases, workshop report

Marta C. Nunes , Edward W. Thommes , Holger Fröhlich , A. Flahault , Julien Arino , M. Baguelin , M. Biggerstaff , Gaston Bizel-Bizellot , R. Borchering , Giacomo Cacciapaglia , S. Cauchemez , Alex Barbier-Chebbah , Carsten Claussen , C. Choirat , M. Cojocaru , C. Commaille-Chapus , C. Hon , J. Kong , Nicolas Lambert , K. Lauer , Thorsten Lehr , Cédric Mahé , V. Maréchal , A. Mebarki , S. Moghadas , R. Niehus , L. Opatowski , F. Parino , Gery Pruvost , Andreas Schuppert , R. Thiébaut , Andrea Thomas-Bachli , Cécile Viboud , Jianhong Wu , P. Crépey , Laurent Coudeville
Infectious Disease Modelling 2024-02-01

Predicting Imminent Cyanobacterial Blooms in Lakes Using Incomplete Timely Data

Christopher M. Heggerud , Jingjing Xu , Hao Wang , Mark A. Lewis , Ron W. Zurawell , Charlie J. G. Loewen , R. Vinebrooke , Pouria Ramazi
Water Resources Research 2024-02-01

2023

DSBplot: Indels in DNA Double-strand Break Repair Experiments.

Tejasvi Channagiri , M. Ferrari , Youngkyu Jeon , Penghao Xu , F. Storici , Natavsa Jonoska
arXiv.org 2023-12-29
0 citations

Insights into B Cell and Antibody Kinetics Against SARS-CoV-2 Variants Using Mathematical Modelling

S. Farhang-Sardroodi , X. Deng , Stéphanie Portet , Julien Arino , Morgan Craig
bioRxiv 2023-11-12

Mathematical Modelling of the First HIV/ZIKV Co-infection Cases in Colombia and Brazil

Jhoana P. Romero–Leiton , I. Sekkak , Julien Arino , Bouchra R. Nasri
Bulletin of Mathematical Biology 2023-09-21

Modelling the transmission of dengue, zika and chikungunya: a scoping review protocol

Jhoana P. Romero–Leiton , K. Acharya , Jane Parmley , Julien Arino , Bouchra R. Nasri
BMJ Open 2023-09-01
0 citations

Fluctuation of growth and photosynthetic characteristics in Prorocentrum shikokuense under phosphorus limitation: Evidence from field and laboratory

A. Shen , Shufei Gao , Christopher M. Heggerud , Hao Wang , Zengling Ma , Sanling Yuan
Ecological Modelling 2023-05-01

SARS-CoV-2 in Nursing Homes: Analysis of Routine Surveillance Data in Four European Countries

T. Delory , Julien Arino , Paul-Emile Haÿ , Vincent Klotz , P. Böelle
Aging and Disease 2023-04-01

Modelling disease mitigation at mass gatherings: A case study of COVID-19 at the 2022 FIFA World Cup

Martin Grunnill , Julien Arino , Zachary McCarthy , N. Bragazzi , Laurent Coudeville , Edward W. Thommes , A. Amiche , Abbas Ghasemi , L. Bourouiba , M. Tofighi , A. Asgary , Mortaza Baky-Haskuee , Jianhong Wu
medRxiv 2023-03-29

A model for the early COVID-19 outbreak in China with case detection and behavioural change

Julien Arino , khalid el hail , M. Khaladi , A. Ouhinou
Biomath 2023-01-27

A simple in-host model for COVID-19 with treatments: model prediction and calibration

Isam Al-Darabsah , Kang-Ling Liao , Stéphanie Portet
Journal of Mathematical Biology 2023-01-10

Journal of Theoretical Biology

A. Hurford , M. Martignoni , J. Loredo-Osti , F. Anokye , Julien Arino , B. Husain , B. Gaas , James Watmough
2023
13 citations

2022

RNA-mediated double-strand break repair in human cells

Youngkyu Jeon , M. Ferrari , Tejasvi Channagiri , Penghao Xu , S. Balachander , Vivian S. Park , Stefania Marsili , Z. Pursell , N. Jonoska , F. Storici
bioRxiv 2022-11-01
0 citations

On non-isomorphic biminimal pots realizing the cube

M. Ferrari , A. Pasotti , T. Traetta
2022-10-27
3 citations

Effect of Movement on the Early Phase of an Epidemic

Julien Arino , E. Milliken
Bulletin of Mathematical Biology 2022-09-23

Assessing transmission risks and control strategy for monkeypox as an emerging zoonosis in a metropolitan area

P. Yuan , Y. Tan , Liu Yang , E. Aruffo , N. Ogden , J. Bélair , J. Heffernan , Julien Arino , James Watmough , H. Carabin , Huaiping Zhu
Journal of Medical Virology 2022-09-11

Models of vimentin organization under actin-driven transport.

Youngmin Park , Cécile Leduc , S. Étienne-Manneville , Stéphanie Portet
Physical Review E 2022-09-06

Using Fluorescence Recovery After Photobleaching data to uncover filament dynamics

J. Dallon , Cécile Leduc , Christopher P. Grant , E. Evans , S. Étienne-Manneville , Stéphanie Portet
PLoS Comput. Biol. 2022-09-01

Modeling vaccination and control strategies for outbreaks of monkeypox at gatherings

P. Yuan , Y. Tan , L. Yang , E. Aruffo , N. Ogden , J. Bélair , Julien Arino , J. Heffernan , James Watmough , H. Carabin , H. Zhu
Frontiers in Public Health 2022-08-16

Pandemic modelling for regions implementing an elimination strategy

A. Hurford , M. Martignoni , J. C. Loredo-Osti , Francis Anokye , Julien Arino , B. Husain , B. Gaas , J. Watmough
medRxiv 2022-07-18

Mathematical modelling of vaccination rollout and NPIs lifting on COVID-19 transmission with VOC: a case study in Toronto, Canada

E. Aruffo , P. Yuan , Y. Tan , E. Gatov , I. Moyles , J. Bélair , James Watmough , S. Collier , Julien Arino , H. Zhu
BMC Public Health 2022-07-15

Impacts of a changing environment on a stoichiometric producer-grazer system: a stochastic modelling approach

Velizar Kirkow , Hao Wang , Pablo Venegas Garcia , Shohel Ahmed , Christopher M. Heggerud
Ecological Modelling 2022-07-01

Dual-wavelength stopped-flow analysis of the lateral and longitudinal assembly kinetics of vimentin

Lovis Schween , N. Mücke , Stéphanie Portet , W. H. Goldmann , H. Herrmann , B. Fabry
bioRxiv 2022-06-09

Impact of noise on the regulation of intracellular transport of intermediate filaments.

Stéphanie Portet , S. Étienne-Manneville , Cécile Leduc , J. Dallon
Journal of Theoretical Biology 2022-06-01

Efficacy of a “stay-at-home” policy on SARS-CoV-2 transmission in Toronto, Canada: a mathematical modelling study

P. Yuan , Juan Li , E. Aruffo , E. Gatov , Qi Li , Tingting Zheng , N. Ogden , B. Sander , Jane Heffernan , S. Collier , Y. Tan , Jun Li , Julien Arino , J. Bélair , James Watmough , J. Kong , I. Moyles , Huaiping Zhu
CMAJ Open 2022-04-01

Mathematical comparison and empirical review of the Monod and Droop forms for resource-based population dynamics

Hao Wang , Pablo Venegas Garcia , Shohel Ahmed , Christopher M. Heggerud
Ecological Modelling 2022-04-01

Disease transmission and mass gatherings: a case study on meningococcal infection during Hajj

L. Coudeville , A. Amiche , Ashrafur Rahman , Julien Arino , B. Tang , Ombeline Jollivet , A. Dogu , E. Thommes , Jianhong Wu
BMC Infectious Diseases 2022-03-22

A general mathematical model for the in vitro assembly dynamics of intermediate filament proteins.

N. Mücke , T. Wocjan , Marine Jacquier , H. Herrmann , Stéphanie Portet
Biophysical Journal 2022-02-01

Estimating social contacts in mass gatherings for disease outbreak prevention and management: case of Hajj pilgrimage

M. Tofighi , A. Asgary , Ghassem Tofighi , M. Najafabadi , Julien Arino , A. Amiche , Ashrafur Rahman , Zachary McCarthy , Nicola Luigi Bragazzi , E. Thommes , L. Coudeville , Martin Grunnill , L. Bourouiba , Jianhong Wu
Tropical Diseases, Travel Medicine and Vaccines 2022-01-17
7 citations

2021

Niche differentiation in the light spectrum promotes coexistence of phytoplankton species: a spatial modelling approach

Christopher M. Heggerud , King-Yeung Lam , Hao Wang
Journal of Mathematical Biology 2021-09-06

Coupling the socio-economic and ecological dynamics of cyanobacteria: Single lake and network dynamics

Christopher M. Heggerud , Hao Wang , M. Lewis
Ecological Economics 2021-08-13

Risk of COVID-19 variant importation – How useful are travel control measures?

Julien Arino , P. Böelle , E. Milliken , Stéphanie Portet
Infectious Disease Modelling 2021-07-11

The origins and potential future of SARS-CoV-2 variants of concern in the evolving COVID-19 pandemic

S. Otto , T. Day , Julien Arino , C. Colijn , J. Dushoff , Michael Li , S. Mechai , G. Van Domselaar , Jianhong Wu , D. Earn , N. Ogden
Current Biology 2021-06-23

Stoichiometric Ecotoxicology for a Multisubstance World

A. Peace , P. Frost , Nicole D. Wagner , M. Danger , Chiara Accolla , P. Antczak , B. Brooks , D. Costello , R. Everett , K. Flores , Christopher M. Heggerud , Roxanne Karimi , Yun Kang , Y. Kuang , James H. Larson , T. Mathews , G. Mayer , J. Murdock , C. Murphy , R. Nisbet , L. Pecquerie , N. Pollesch , E. Rutter , K. Schulz , J. Scott , L. Stevenson , Hao Wang
BioScience 2021-01-20

Mathematical modelling of OAS2 activation by dsRNA and effects of dsRNA lengths

Deokro Lee , Amit Koul , Nikhat Lubna , S. McKenna , Stéphanie Portet
2021

A mathematical analysis of an activator-inhibitor Rho GTPase model

V. O. Juma , L. Dehmelt , Stéphanie Portet , A. Madzvamuse
Journal of Computational Dynamics 2021

Infectious Disease Modelling

Stephanie Portet
2021-01-01
0 citations

2020

Secondary Structure Ensemble Analysis via Community Detection

H. Du , M. Ferrari , Christine E. Heitsch , Forrest Hurley , C. Mennicke , Blair D. Sullivan , Bin Xu
Association for Women in Mathematics Series 2020-12-30
0 citations

Spread of Dutch elm disease in an urban forest

N. Bajeux , Julien Arino , Stéphanie Portet , R. Westwood
2020-12-15

Quarantine and the risk of COVID-19 importation

J. Arino , N. Bajeux , Stéphanie Portet , James Watmough
Epidemiology and Infection 2020-12-09

Optogenetic Tuning Reveals Rho Amplification-Dependent Dynamics of a Cell Contraction Signal Network

Dominic Kamps , J. Koch , V. O. Juma , Eduard Campillo-Funollet , Melanie Graessl , Soumya Banerjee , T. Mazel , Xi Chen , Yaowen Wu , Stéphanie Portet , A. Madzvamuse , P. Nalbant , L. Dehmelt
Cell Reports 2020-12-01

Efficacy of stay-at-home policy and transmission of COVID-19 in Toronto, Canada: a mathematical modeling study

P. Yuan , Juan Li , E. Aruffo , Qi Li , Tingting Zheng , N. Ogden , B. Sander , Jane Heffernan , E. Gatov , E. Gournis , Sarah Collier , Y. Tan , Jun Li , Julien Arino , J. Bélair , James Watmough , J. Kong , I. Moyles , Huaiping Zhu
medRxiv 2020-10-21
11 citations

Assessing the risk of COVID-19 importation and the effect of quarantine

J. Arino , N. Bajeux , Stéphanie Portet , James Watmough
medRxiv 2020-08-14
5 citations

Quantifying the annual incidence and underestimation of seasonal influenza: A modelling approach

Zachary McCarthy , S. Athar , Mahnaz Alavinejad , Christopher Chow , I. Moyles , Kyeongah Nah , J. Kong , N. Agrawal , Ahmed Jaber , L. Keane , Sam Liu , M. Nahirniak , Danielle St Jean , R. Romanescu , J. Stockdale , Bruce Seet , L. Coudeville , E. Thommes , A. Taurel , Jason Lee , Thomas Shin , Julien Arino , J. Heffernan , A. Chit , Jianhong Wu
Theoretical Biology and Medical Modelling 2020-07-10

Scénarios de modélisation de l’épidémie de COVID-19 au Canada

N. Ogden , A. Fazil , Julien Arino , Philippe Berthiaume , David N. Fisman , A. L. Greer , A. Ludwig , Victoria Ng , Ashleigh R. Tuite , P. Turgeon , Lisa A. Waddell , Jianhong Wu
2020-06-04
2 citations

Modelling scenarios of the epidemic of COVID-19 in Canada.

N. Ogden , Aamir Fazil , Julien Arino , Philippe Berthiaume , D. Fisman , A. Greer , A. Ludwig , V. Ng , A. Tuite , P. Turgeon , L. Waddell , Jianhong Wu
Canada communicable disease report = Releve des maladies transmissibles au Canada 2020-06-04

Transient Dynamics of a Stoichiometric Cyanobacteria Model via Multiple-Scale Analysis

Christopher M. Heggerud , Hao Wang , M. Lewis
SIAM Journal on Applied Mathematics 2020-05-19

A simple model for COVID-19

Julien Arino , Stéphanie Portet
Infectious Disease Modelling 2020-04-28

On the minimum number of bond-edge types and tile types: An approach by edge-colorings of graphs

S. Bonvicini , M. Ferrari
Discrete Applied Mathematics 2020-04-01
11 citations

Mathematical epidemiology in a data-rich world

Julien Arino
Infectious Disease Modelling 2020-01-07

A primer on model selection using the Akaike Information Criterion

Stéphanie Portet
Infectious Disease Modelling 2020-01-07

Disease transmission and mass gatherings : a case study on meningococcal infection during Hajj Supplementary Text 1

Laurent Coudeville , A. Amiche , Ashrafur Rahman , Julien Arino , B. Tang , Ombeline Jollivet , A. Dogu , Edward W. Thommes , Jianhong , Wu
2020
1 citations

2019

Current Trends in Mathematical Epidemiology

Julien Arino , James Watmough
Bulletin of Mathematical Biology 2019-11-01

Decomposition of some Hankel matrices generated by the generalized rencontres polynomials

M. Ferrari , E. Munarini
Linear Algebra and its Applications 2019-04-15
6 citations

Deciphering the transport of elastic filaments by antagonistic motor proteins.

Stéphanie Portet , Cécile Leduc , S. Étienne-Manneville , J. Dallon
Physical Review E 2019-04-01

Number of Source Patches Required for Population Persistence in a Source–Sink Metapopulation with Explicit Movement

Julien Arino , N. Bajeux , Steve Kirkland
Bulletin of Mathematical Biology 2019-03-07

Stochastic modeling reveals how motor protein and filament properties affect intermediate filament transport.

J. Dallon , Cécile Leduc , S. Étienne-Manneville , Stéphanie Portet
Journal of Theoretical Biology 2019-03-01

Analysis and simulations of coupled-bulk-surface PDES with applications to Biology Organisers :

A. Madzvamuse , D. Cusseddu , L. Edelstein-Keshet , J. Mackenzie , Stéphanie Portet , A. Madzvamuse , M. Möller , L. D. Wittwer , M. Multerer , D. Iber , S. Aland
2019
0 citations

2018

Insertions Yielding Equivalent Double Occurrence Words

Daniel A. Cruz , M. Ferrari , N. Jonoska , Lukas Nabergall , M. Saito
Fundamenta Informaticae 2018-11-28
3 citations

Transformations on Double Occurrence Words Motivated by DNA Rearrangement

Daniel A. Cruz , M. Ferrari , N. Jonoska , Lukas Nabergall , M. Saito
arXiv.org 2018-11-28
0 citations

A coupled bulk-surface model for cell polarisation.

D. Cusseddu , L. Edelstein-Keshet , J. Mackenzie , Stéphanie Portet , A. Madzvamuse
Journal of Theoretical Biology 2018-09-12

Investigation of Novel Regulation of N-myristoyltransferase by Mammalian Target of Rapamycin in Breast Cancer Cells

Marine Jacquier , S. Kuriakose , Apurva Bhardwaj , Yang Zhang , A. Shrivastav , Stéphanie Portet , Shailly Varma Shrivastav
Scientific Reports 2018-08-28

Cyclic compositions and cycles of the hypercube

M. Ferrari , N. Z. Salvi
2018-04-24
2 citations

Design formalism for DNA self-assembly of polyhedral skeletons using rigid tiles

M. Ferrari , A. Cook , Alana Houlihan , R. Rouleau , N. Seeman , Greta Pangborn , Joanna A. Ellis-Monaghan
Journal of Mathematical Chemistry 2018-01-31
11 citations

2017

Spatio-temporal spread of infectious pathogens of humans

Julien Arino
Infectious Disease Modelling 2017-05-01
0 citations

Intermediate filament dynamics: Disassembly regulation

Chengjun Sun , Julien Arino , Stéphanie Portet
2017
6 citations

Aperiodic Compositions and Classical Integer Sequences

M. Ferrari , N. Z. Salvi
Journal of Integer Sequences 2017
3 citations

2016

Toward Standardizing a Lexicon of Infectious Disease Modeling Terms

Rachael M. Milwid , A. Steriu , Julien Arino , J. Heffernan , A. Hyder , D. Schanzer , E. Gardner , M. Haworth-Brockman , Harpa Isfeld-Kiely , J. Langley , S. Moghadas
Frontiers in Public Health 2016-09-28

ON CIRCULAR DISARRANGED STRINGS OF SEQUENCES

F. Beggas , M. Ferrari , H. Kheddouci , N. Z. Salvi
2016-09-21
0 citations

Revisiting a two-patch SIS model with infection during transport.

Julien Arino , Chengjun Sun , Wei Yang
Mathematical medicine and biology : a journal of the IMA 2016-03-01

Stratégies pour l ’ utilisation de l ’ oseltamivir et du zanamivir durant les éclosions pandémiques

Elsa Hansen MEng , Troy Day , Julien Arino , Jianhong Wu , Seyed M. Moghadas
2016
0 citations

2015

Local stability analysis of ratio-dependent predator-prey models with predator harvesting rates

Christopher M. Heggerud , K. Lan
Applied Mathematics and Computation 2015-11-01

Keratin Dynamics: Modeling the Interplay between Turnover and Transport

Stéphanie Portet , A. Madzvamuse , A. Chung , R. Leube , R. Windoffer
PLoS ONE 2015-03-30

Epidemiological implications of mobility between a large urban centre and smaller satellite cities

Julien Arino , Stéphanie Portet
Journal of Mathematical Biology 2015-01-14
2 citations

2013

Dynamics of in vitro intermediate filament length distributions.

Stéphanie Portet
Journal of Theoretical Biology 2013-09-07

Entry and exit screening of airline travellers during the A(H1N1) 2009 pandemic: a retrospective evaluation.

K. Khan , R. Eckhardt , J. Brownstein , R. Naqvi , Wei Hu , David Kossowsky , D. Scales , Julien Arino , Michael Macdonald , Jun Wang , J. Sears , M. Cetron
Bulletin of the World Health Organization 2013-03-27

Impact of viral mutation on suppression of infection by cytotoxic T lymphocytes

Julien Arino , N. Madras , Stéphanie Portet , B. Sahai
2013
0 citations

THE EDUCATIONAL TECHNOLOGY, A CHALLENGE FOR CHANGE

I. Valenzuela , E. Guillermo , I. León , R. Leyva , C. Parra , C. J. M. Montemayor , J. Arino , M. Ulín , J. F. T. Cabal
2013
0 citations

2012

Infectious disease surveillance and modelling across geographic frontiers and scientific specialties.

K. Khan , S. McNabb , Z. Memish , R. Eckhardt , Wei Hu , David Kossowsky , J. Sears , Julien Arino , Anders Johansson , M. Barbeschi , B. Mccloskey , B. Henry , M. Cetron , J. Brownstein
Lancet. Infectious Diseases (Print) 2012-03-01

A metapopulation model for malaria with transmission-blocking partial immunity in hosts

Julien Arino , A. Ducrot , P. Zongo
Journal of Mathematical Biology 2012-02-01

Mass gatherings: Infectious disease surveillance and modeling across geographic frontiers and scientific disciplines

K. Khan , S. McNabb , Z. Memish , R. Eckhardt , Wei Hu , David Kossowsky , J. Sears , Julien Arino , Anders Johansson , M. Barbeschi , B. Mccloskey , B. Henry , M. Cetron , J. Brownstein
2012
0 citations

2011

Effect of media-induced social distancing on disease transmission in a two patch setting

Chengjun Sun , Wei Yang , Julien Arino , K. Khan
Mathematical Biosciences 2011-02-04

Evaluation of vaccination strategies during pandemic outbreaks.

C. Bowman , Julien Arino , S. Moghadas
Mathematical biosciences and engineering : MBE 2011

Competitive interference between influenza viral strains

S. Moghadas , C. Bowman , Julien Arino
2011
5 citations

Pandemic influenza: Modelling and public health perspectives.

Julien Arino , C. Bauch , F. Brauer , S. Driedger , A. Greer , S. Moghadas , N. J. Pizzi , B. Sander , A. Tuite , P. van den Driessche , James Watmough , Jianhong Wu , P. Yan
Mathematical biosciences and engineering : MBE 2011

2010

Effect of a sharp change of the incidence function on the dynamics of a simple disease

Julien Arino , C. McCluskey
Journal of Biological Dynamics 2010-05-04

Global public health implications of a mass gathering in Mecca, Saudi Arabia during the midst of an influenza pandemic.

K. Khan , Z. Memish , Aneesh Chabbra , J. Liauw , Wei Hu , D. Janes , J. Sears , Julien Arino , Michael Macdonald , Felipe Calderón , Paulo Raposo , C. Heidebrecht , Jun Wang , Angie Chan , J. Brownstein , M. Gardam
Journal of Travel Medicine 2010-03-01

Strategies for the use of oseltamivir and zanamivir during pandemic outbreaks.

E. Hansen , T. Day , Julien Arino , Jianhong Wu , S. Moghadas
The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale 2010

2009

Spread of a novel influenza A (H1N1) virus via global airline transportation.

K. Khan , Julien Arino , Wei Hu , Paulo Raposo , J. Sears , Felipe Calderón , C. Heidebrecht , Michael Macdonald , J. Liauw , Angie Chan , M. Gardam
New England Journal of Medicine 2009-12-16

Vimentin intermediate filament formation: in vitro measurement and mathematical modeling of the filament length distribution during assembly.

Stéphanie Portet , N. Mücke , R. Kirmse , J. Langowski , M. Beil , H. Herrmann
Langmuir 2009-05-13

Simulating the formation of keratin filament networks by a piecewise-deterministic Markov process.

M. Beil , S. Lück , F. Fleischer , Stéphanie Portet , W. Arendt , V. Schmidt
Journal of Theoretical Biology 2009-02-01

Antiviral resistance during pandemic influenza: implications for stockpiling and drug use

Julien Arino , C. Bowman , S. Moghadas
BMC Infectious Diseases 2009-01-22

An analysis of Canada's vulnerability to emerging infectious disease threats via the global airline transportation network

K. Khan , Julien Arino , Felipe Calderón , Angie Chan , M. Gardam , C. Heidebrecht , Wei Hu , D. Janes , Michael Macdonald , J. Sears , Paulo Raposo , S. Wang
2009
12 citations

Diseases in metapopulations

Julien Arino
2009

2008

An in vivo intermediate filament assembly model.

Stéphanie Portet , Julien Arino
Mathematical biosciences and engineering : MBE 2008-12-01

A model for influenza with vaccination and antiviral treatment.

Julien Arino , F. Brauer , P. van den Driessche , James Watmough , Jianhong Wu
Journal of Theoretical Biology 2008-07-07

The logistic map

Julien Arino
2008
0 citations

2007

Propagation of localized bending deformations in microtubules

J. Tuszynski , Stéphanie Portet , J. Dixon
2007-12-01

Effect of pathogen-resistant vectors on the transmission dynamics of a vector-borne disease

Julien Arino , C. Bowman , A. Gumel , Stéphanie Portet
Journal of Biological Dynamics 2007-10-01

A Quantitative Kinetic Model for the in Vitro Assembly of Intermediate Filaments from Tetrameric Vimentin*

R. Kirmse , Stéphanie Portet , N. Mücke , U. Aebi , H. Herrmann , J. Langowski
Journal of Biological Chemistry 2007-06-22

Quarantine in a multi-species epidemic model with spatial dynamics.

Julien Arino , R. Jordan , P. van den Driessche
Mathematical Biosciences 2007-03-01

A final size relation for epidemic models.

Julien Arino , F. Brauer , P. van den Driessche , James Watmough , Jianhong Wu
Mathematical biosciences and engineering : MBE 2007-02-01

2006

An alternative formulation for a delayed logistic equation.

Julien Arino , Lin Wang , G. Wolkowicz
Journal of Theoretical Biology 2006-07-07

Simple models for containment of a pandemic

Julien Arino , F. Brauer , P. van den Driessche , James Watmough , Jianhong Wu
Journal of the Royal Society Interface 2006-06-22

Metapopulations epidemic models. A survey

Julien Arino , P. Driessche
2006
23 citations

Global Travel and Severe Acute Respiratory Syndrome (SARS)

K. Khan , Xiamei Jiang , Julien Arino
2006
0 citations

Simple models for containment of a pandemic Supplementary Information

Julien Arino , F. Brauer , P. Driessche , James Watmough , Jianhong Wu
2006
0 citations

2005

Gravitational Symmetry Breaking Leads to a Polar Liquid Crystal Phase of Microtubules In Vitro

J. Tuszynski , M. Satarić , Stéphanie Portet , J. Dixon
Journal of biological physics (Print) 2005-12-01

Nonlinear assembly kinetics and mechanical properties of biopolymers

J. Tuszynski , Stéphanie Portet , J. Dixon
2005-11-30

Insights into the quaternary association of proteins through structure graphs: a case study of lectins.

Chair G Banting , bullet Bristol , G. Salvesen , La Jolla , A. Toker , bullet Boston , D. R. Alessi , bullet Dundee , R. A. Challiss , bullet Leicester , S. V. Graham , bullet Glasgow , S. Gutteridge , bullet Newark , De D Hoekstra , bullet Groningen , N. M. Hooper , bullet Leeds , J. P. Kehrer , bullet Pullman , Wa C Mackintosh , K. Mayo , bullet Minneapolis , H. Wallace , bullet Aberdeen , M. Walsh , bullet Calgary Publisher , P. J. Starley , M. Cunningham , M. Thorne , S. M. Hobday , L. Ball , E. Elloway , J. Mockridge , S. Schendel , J. Arino , Barcelona , A. Baici , J. Blank , M. Cambridge , M. Blatt , Glasgow , P. Board , M. Bogyo , P. J. Stanford , Bristol Booth , A. Boraston , Bc Victoria , L. Bosca , Y. Bourne , B. Brüne , D. Carling , London , A. Clerk , I. Collinson , G. Bristol , J. Kingston , Couchman , D. A. Davis , Sydney Day , C. Duckett , Ann Arbor , B. Engelmann , R. Epand , P. Hamilton , Fay , R. Fell , Ferraris , N. Newark , B. Foxwell , J. Frère , A. Galione , P. G. W. Gettins , D. Gillespie , R. Golsteyn , Croissy-Sur-Seine , S. Goodbourn , P. London , B. Grimaldi , B. Hallberg , Singapore Halliwell , P. Haris , L. Hedstrom , M. Waltham , F. Hegardt , S. High , I. Holland , J. Hsuan , S. London , R. Huber , B. Kalluri , Milwaukee Kalyanaraman , M. Kazanietz , I. Kovach , Washington D C , P. Kuchel , Sydney , J. E. Ladbury , J. Lakey , Newcastle Upon , Tyne , R. Leduc , Sherbrooke , E. Levin , Long Beach , Ca , L. Machesky , Birmingham , E. Manser , R. Marais , P. London , R. Maurel , M. Mayer , H. Meisterernst , I. Mellor , G. Morgan , A. J. Morris , W. M. Uller-Esterl , Frankfurt , B. Mulloy , M. South. , A. Munro , M. Murphy , M. E. Noble , L. Obeid , M. Charleston , M. Parenti , M. Parry , S. Patel , G. London , M. Pavitt , Cologne Paulsson , L. Persson , A. Postle , D. R. Richardson , S. Roberts , N. J. P. Ryba , J. Sandy , N. Savery , J. R. Sayers , Sheffield , S. C. Sealfon , New York. , G. S. Shelness , Winston-Salem , Nc , P. R. Shepherd , A. Sim , N. Callaghan , Bonnie F. Sloane , E. Smythe , S. Stack , C. W. Taylor , M. Thumm , M. Titheradge , Brighton , A. B. Tobin , S. Tooze , M. Torti , Pavía , C. Troy , Van Aalten , M. Dundee , York Van Der Woude , B. Vanhaesebroeck , S. London , M. Ward , J. Welham , J. Woessner , York , Nc Durham , C. Zurzolo , Paris
Biochemical Journal 2005-10-01
58 citations

Physical interpretation of microtubule self-organization in gravitational fields

J. Tuszynski , M. Satarić , Stéphanie Portet , J. Dixon
2005-06-06

A multi-species epidemic model with spatial dynamics.

Julien Arino , Jonathan R. Davis , D. Hartley , R. Jordan , Joy M. Miller , P. van den Driessche
Mathematical medicine and biology : a journal of the IMA 2005-06-01

Elastic vibrations in seamless microtubules

Stéphanie Portet , J. Tuszynski , C. Hogue , J. Dixon
European Biophysics Journal 2005-05-11

Anisotropic elastic properties of microtubules

J. Tuszynski , T. Luchko , Stéphanie Portet , J. Dixon
The European Physical Journal E : Soft matter 2005-04-06

Disease Spread in Metapopulations

Julien Arino , P. Driessche
2005

2004

Intermediate filament networks: in vitro and in vivo assembly models.

Stéphanie Portet , J. Vassy , C. Hogue , Julien Arino , O. Arino
Comptes rendus. Biologies 2004-11-01

Ionic wave propagation along actin filaments.

J. Tuszynski , Stéphanie Portet , J. M. Dixon , C. Luxford , H. Cantiello
Biophysical Journal 2004-04-01

Modeling the static and dynamic elastic properties of microtubules

Stéphanie Portet , J. Tuszynski , J. Dixon
2004-03-01
0 citations

An epidemiology model that includes a leaky vaccine with a general waning function

Julien Arino , K. Cooke , P. Driessche , J. Velasco-Hernández
2004-02-01

2003

Weightlessness acts on human breast cancer cell line MCF-7.

J. Vassy , Stéphanie Portet , M. Beil , G. Millot , F. Fauvel-Lafève , G. Gasset , D. Schoevaert
Advances in Space Research 2003-10-01

Models of spatial and orientational self-organization of microtubules under the influence of gravitational fields.

Stéphanie Portet , J. Tuszynski , J. Dixon , M. Satarić
Physical review. E, Statistical, nonlinear, and soft matter physics 2003-08-11

Organization of the cytokeratin network in an epithelial cell.

Stéphanie Portet , O. Arino , J. Vassy , D. Schöevaërt
Journal of Theoretical Biology 2003-08-07

Large amplitude spatial fluctuations in the boundary region of the Bose--Einstein condensate in the Gross--Pitaevskii régime

J. Tuszynski , J. W. Middleton , Stéphanie Portet , J. Dixon , O. Bang , P. Christiansen , M. Salerno
2003-07-15

Global Results for an Epidemic Model with Vaccination that Exhibits Backward Bifurcation

C. McCluskey , Julien Arino , P. Driessche
SIAM Journal on Applied Mathematics 2003

A multi-city epidemic model

Julien Arino , P. van den Driessche
2003-01-01

The Basic Reproduction Number in a Multi-city Compartmental Epidemic Model

Julien Arino , P. Driessche
Multidisciplinary International Symposium on Positive Systems: Theory and Applications 2003

2002

A discrete, size-structured model of phytoplankton growth in the chemostat

Julien Arino , J. Gouzé , A. Sciandra
Journal of Mathematical Biology 2002-10-01

A size-structured, non-conservative ODE model of the chemostat.

Julien Arino , J. Gouzé
Mathematical Biosciences 2002-05-01

phytoplancton en chemostat

Julien Arino
2002
0 citations

2001

The effect of weightlessness on cytoskeleton architecture and proliferation of human breast cancer cell line MCF-7.

J. Vassy , Stéphanie Portet , M. Beil , G. Millot , F. Fauvel-Lafève , A. Karniguian , G. Gasset , T. Irinopoulou , F. Calvo , J. Rigaut , D. Schoevaert
The FASEB Journal 2001-04-01
119 citations

Effect of weightlessness on cytoskeleton architecture and proliferation of human breast cancer cell line MCF‐7

J. Vassy , Stéphanie Portet , M. Beil , G. Millot , F. Fauvel-Lafève , A. Karniguian , G. Gasset , T. Irinopoulou , F. Calvo , J. Rigaut , D. Schoevaert
2001-04-01

2000

1999

Quantitative analysis of cytokeratin network topology in the MCF7 cell line.

Stéphanie Portet , J. Vassy , M. Beil , G. Millot , A. Hebbache , J. Rigaut , D. Schöevaërt
Cytometry 1999-03-01

1998

New perspectives in swine pseudorabies vaccination

M. Ferrari , M. Losio , M. Romanelli , A. Corradi
1998
0 citations

Segmentation d'images non supervisée en logique floue

A. Hebbache , Stéphanie Portet , F. Klein
1998
0 citations

1997

Estimation of the asymptotoc fractal dimension of grey-scale images

J. Rigaut , A. M. Downs , J. Vassy , G. Millot , Stéphanie Portet
1997
0 citations